Advancement of bulk sequencing

See the table below for details by neuron type.

Validated genetic approach: the strain listed proved bright and specific enough for FACS isolation. Other strains may have been considered, but not validated. All validated strains are available at the CGC.

Sorting/Sequencing: the strain listed was successfully sorted and sequenced.

First data release: some neuron types were initially released in GSE169137. All neurons are available in GSE229078.

Neuronal
class
Validated genetic approachSorting/SequencingFirst data release
AWAPY10421 [gpa-4p(d6)::myrGFP]doneGSE169137
LUAXE2299 pha-1(e2123); wpEx389 [C39H7.2::NLS GFP + pha-1]doneGSE229078
PHAOH16065 otls747 [srg-13p::gfp]; otls355 [rab-3p::2xNLS::TagRFP]doneGSE229078
PHBno
RMFno
RMHno
SAAno
SIBno
ASHno
RMEOH17124 otIs837 [unc-25(prom3)(del1)::GFP]doneGSE229078
PDEno
ALMno
AVMgcy-35::GFP; mec-3::RFPdoneGSE229078
FLPTU5066 mec-3p::RFP;sto-5p::GFPno
PLMno
PVMTU6276 uIs115 [mec-17p::RFP]; kuIs70 [alr-1::GFP; rol-6(D)]doneGSE229078
SDQno
RIVno
RMD DVOH16077 pha-1 (e2123) otEx7419 [mgl-1 p::gfp,pha-1 (+)]done
SMDOH15507 otIs439 [lad-2::GFP]; hdIs32 [glr-1::dsRED2]doneGSE229078
AINOH16151 lgc-35::tagRFP; ynIs34[flp-19::GFP]; pha-1doneGSE229078
ASno
AVBno
DBno
DVAyes (see Robinson et al., Plos One, 2013)no
PDAno
PVCOH16749 hdIs32[glr-1::DsRed2]; ynIs54[flp-20p::GFP]doneGSE229078
RIMOH16917 otEx7693 [F23H12.7p(RIM)::tagRFP + pha-1(+)]; pha-1(e2123)doneGSE229078
VANC3577 ufIs26 [unc-4p::mCherry + lin-15(+)] II. otIs707 [bnc-1p(1.8kb)::GFP]no
VBNC3577: bnc-1::GFP; ufIs26 [unc-4::mCh]doneGSE229078
AVDno
AVENC1750[KM173(opt-3::GFP[pRF4]); hdIs32 (glr-1::DsRed2)]doneGSE169137
AVANC1749[OH4326(rig-3::GFP[pha-1+]); hdIs32 (glr-1::DsRed2)]doneGSE229078
DVCNC3540: otIs458_[ceh-63prom::GFP, unc-119(+)]doneGSE229078
PHCno
AFDoyls17 [gcy-8p::GFP, lin-15(+)]doneGSE229078
AIBno
ASELOH3191 otIs3 V [gcy-7::GFP + lin-15(+)]doneGSE229078
ASERVH804 ntls1[gcy-5p::GFP]doneGSE229078
AWCOH16052 otls745 [ceh-36p3::npp-9::mCherry::BLRP·:3x FLAG::npp-9 3'UTR]doneGSE229078
CEPOH17489 egIs1 [dat-1p::GFP]. otIs860 [flp-33p::tagRFP]doneGSE229078
ASGOH14973 pha-1(e2123);him-5(e1490) otEx6966[srw-119prom::GFP, pha-1(+)]doneGSE169137
AVGZM9592 hpIs670 [pnmr-1::GFP ZF; pglr-5::ZIF-1::SL2::wCherry; lin-15(+)]doneGSE169137
PVPXE3004 wpEx505[Pocr-3::mEGFP] ;pha-1(e2123)IIIdoneGSE229078
RIAIK705 njls10[glr-3::GFP]doneGSE229078
ADFNC3604 myls13 [klp-6p::GFP]. oyIs51 [srh-142::RFP]doneGSE229078
ASJno
AIMotIs520 [eat-4::prom11] (also in PHC)doneGSE229078
AIZno
ALAno
AQRno
AUAno
AVFno
AVLNY2051 ynIs51 [Pflp-22::GFP] ,[flp-22p::GFP]; him-5(e1490)doneGSE229078
CANwpIs107[F49C12.10::GFP]IdoneGSE229078
PVQOH16952 otEx7568 [nlp-17::GFP + pha-1(+)]; pha-1(e2123)doneGSE229078
PVTno
RIDno
RIFno
RIGno
RMGOH17211: pha-1(e2123) otEx7567[nlp-56p::gfp, pha-1(+)]done
URBno
URXno
URYno
VCNC3524 ufIs26 [punc-4::mCherry] II; vsIs13[lin-11::pes-10::GFP + lin-15(+)] IVdoneGSE229078
AIAno
BDUno
HSNOH15925 otIs737[otEx7359[cat-4p::mCherry, rol-6]]doneGSE229078
IL2NC3604 myls13 [klp-6p::GFP]. oyIs51 [srh-142::RFP]doneGSE229078
IL2 D/VNC4085: otIs846 [egas-1p::GFP + unc-122::GFP]; otIs355 [rab-3p(prom1)::2xNLS::TagRFP] IV
IL2 L/Ryes
URAno
IL1NY2021 ynls21[flp-3p::GFP, rol-6]doneGSE229078
ASKOH15857
[srg-8p::gfp; inx-6p18::tagRFP]
doneGSE229078
DVBXE2835 wpIs39 [unc-47p:mCherry] X. otIs92 [flp-10::GFP]doneGSE229078
ADLOH16093 pha-1 (e2123) otEx6853 [srv-3p:: gfp; pha-1 (+); otls356[rab-3p::2xNLS::TagRFP]doneGSE229078
ASIFK181 ksIs2[daf-7p::GFP, rol-6(su10060]doneGSE229078
PVRno
I1OH18012: pha-1(e2123); otEx7948 [lgc-8p::mNeonGreen::PH::p10; pha-1(+)]no
I2no
I3OH18011: pha-1(e2123); otEx7947 [W02A2.5p::GFP; pha-1(+)]no
I4no
I5ynIs37[flp-13::gfp]; ufIs26[unc-4::mCherry]doneGSE229078
I6no
M1no
M2no
M3no
M4OH16144 ceh-28p::4NLS::GFP done
M5no
MCno
MIno
NSMLX837[tph-1::GFP]doneGSE229078
OLQOH16177 otEx7647 ttll-9p::GFPdoneGSE229078
RIBDCR9309: pha-1(e2123) III; olaEx5505[Psto-3B::GFP; Pinx-1: :mCherry; pha-1 rescueno
RIPno
RIRno
RIHno
SABno
SIAXE2789 ccIs4595 [ceh-24::GFP + rol-6(su1006)]. wpEx482 [ceh-17::NLS::TagRFP + pha-1(+)]doneGSE229078
SMBOH16781 otIs796 X[flp-12DEL3::gfp; unc-122p::Red]doneGSE229078
ADAno
ADEno
AIYOH99 mgIs18 [ttx-3p::GFP]doneGSE229078
ALNno
AVHOH16483 [unc-119(ed3); otIs768 [hlh-34p::gfp, unc-119(+)]]doneGSE229078
AVJno
AVKZX1834 zxIs31[pflp-1(332bp)::mCherry]
doneGSE229078
AWBCX3553_lin-15(n765) kyls104[str-1p::GFP, lin-15(+)]doneGSE169137
BAGRJP567_ynls64[flp-17p::GFP]doneGSE229078
DANC2913_[hdIs1 (unc-53::GFP rol-6(su1000); ufIs26 (unc-4::mCherry)]. Sorted GFP+/mCherry+ cells.doneGSE229078
DDNC3296_juIs223[pttr-39::mCherry; pttx-3::GFP]; ynIs37[flp-13::GFP]. DDs are GFP+/mCherry+doneGSE169137
OLLOH16719 otIs138 [ser-2p3 + rol-6(su1006)] X; otIs521[eat-4prom8::tagRFP + ttx-3::GFP]doneGSE229078
PDBno
PLNno
PQRno
PVDNC3182_[otIs138(ser2prom3::GFP + rol-6); otIs396(ace-1prom2::NLS::TagRFP); otIs181(dat-1::mCherry)]doneGSE169137
PVNno
PVWno
RICOH16150 nIs107(tbh-1::gfp) III; zfIs10(tdc-1::m-cherry) IVdoneGSE229078
RISHBR1261 goeIs500[flp-11prom::mKate; unc-119(+)]doneGSE229078
RISNC2015 [ynIs40(flp-11::GFP); hdIs32(glr-1::DsRed2]doneGSE229078
VDNC3296 juIs223[pttr-39::mCherry; pttx-3::GFP]; ynIs37[flp-13::GFP]. VDs are mCherry only.doneGSE169137
RMD LRno