Advancement of bulk sequencing

See the table below for details by neuron type.

Validated genetic approach: the strain listed proved bright and specific enough for FACS isolation. Other strains may have been considered, but not validated. All validated strains are available at the CGC.

Sorting/Sequencing: the strain listed was successfully sorted and sequenced.

First data release: some neuron types were initially released in GSE169137. All neurons are available in GSE229078.




	Neuronal
class Validated genetic approach Sorting/Sequencing First data release




	AWA PY10421 [gpa-4p(d6)::myrGFP] done GSE169137


	LUA XE2299 pha-1(e2123); wpEx389 [C39H7.2::NLS GFP + pha-1] done GSE229078


	PHA OH16065 otls747 [srg-13p::gfp]; otls355 [rab-3p::2xNLS::TagRFP] done GSE229078


	PHB no 


	RMF no 


	RMH no 


	SAA no 


	SIB no 


	ASH no 


	RME OH17124 otIs837 [unc-25(prom3)(del1)::GFP] done GSE229078


	PDE no 


	ALM no 


	AVM gcy-35::GFP; mec-3::RFP done GSE229078


	FLP TU5066 mec-3p::RFP;sto-5p::GFP no 


	PLM no 


	PVM TU6276 uIs115 [mec-17p::RFP]; kuIs70 [alr-1::GFP; rol-6(D)] done GSE229078


	SDQ no 


	RIV no 


	RMD DV OH16077 pha-1 (e2123) otEx7419 [mgl-1 p::gfp,pha-1 (+)] done 


	SMD OH15507 otIs439 [lad-2::GFP]; hdIs32 [glr-1::dsRED2] done GSE229078


	AIN OH16151 lgc-35::tagRFP; ynIs34[flp-19::GFP]; pha-1 done GSE229078


	AS no 


	AVB no 


	DB no 


	DVA yes (see Robinson et al., Plos One, 2013) no 


	PDA no 


	PVC OH16749 hdIs32[glr-1::DsRed2]; ynIs54[flp-20p::GFP] done GSE229078


	RIM OH16917 otEx7693 [F23H12.7p(RIM)::tagRFP + pha-1(+)]; pha-1(e2123) done GSE229078


	VA NC3577 ufIs26 [unc-4p::mCherry + lin-15(+)] II. otIs707 [bnc-1p(1.8kb)::GFP] no 


	VB NC3577: bnc-1::GFP; ufIs26 [unc-4::mCh] done GSE229078


	AVD no 


	AVE NC1750[KM173(opt-3::GFP[pRF4]); hdIs32 (glr-1::DsRed2)] done GSE169137


	AVA NC1749[OH4326(rig-3::GFP[pha-1+]); hdIs32 (glr-1::DsRed2)] done GSE229078


	DVC NC3540: otIs458_[ceh-63prom::GFP, unc-119(+)] done GSE229078


	PHC no 


	AFD oyls17 [gcy-8p::GFP, lin-15(+)] done GSE229078


	AIB no 


	ASEL OH3191 otIs3 V [gcy-7::GFP + lin-15(+)] done GSE229078


	ASER VH804 ntls1[gcy-5p::GFP] done GSE229078


	AWC OH16052 otls745 [ceh-36p3::npp-9::mCherry::BLRP·:3x FLAG::npp-9 3'UTR] done GSE229078


	CEP OH17489 egIs1 [dat-1p::GFP]. otIs860 [flp-33p::tagRFP] done GSE229078


	ASG OH14973 pha-1(e2123);him-5(e1490) otEx6966[srw-119prom::GFP, pha-1(+)] done GSE169137


	AVG ZM9592 hpIs670 [pnmr-1::GFP ZF; pglr-5::ZIF-1::SL2::wCherry; lin-15(+)] done GSE169137


	PVP XE3004 wpEx505[Pocr-3::mEGFP] ;pha-1(e2123)III done GSE229078


	RIA IK705 njls10[glr-3::GFP] done GSE229078


	ADF NC3604 myls13 [klp-6p::GFP]. oyIs51 [srh-142::RFP] done GSE229078


	ASJ no 


	AIM otIs520 [eat-4::prom11] (also in PHC) done GSE229078


	AIZ no 


	ALA no 


	AQR no 


	AUA no 


	AVF no 


	AVL NY2051 ynIs51 [Pflp-22::GFP] ,[flp-22p::GFP]; him-5(e1490) done GSE229078


	CAN wpIs107[F49C12.10::GFP]I done GSE229078


	PVQ OH16952 otEx7568 [nlp-17::GFP + pha-1(+)]; pha-1(e2123) done GSE229078


	PVT no 


	RID no 


	RIF no 


	RIG no 


	RMG OH17211: pha-1(e2123) otEx7567[nlp-56p::gfp, pha-1(+)] done 


	URB no 


	URX no 


	URY no 


	VC NC3524 ufIs26 [punc-4::mCherry] II; vsIs13[lin-11::pes-10::GFP + lin-15(+)] IV done GSE229078


	AIA no 


	BDU no 


	HSN OH15925 otIs737[otEx7359[cat-4p::mCherry, rol-6]] done GSE229078


	IL2 NC3604 myls13 [klp-6p::GFP]. oyIs51 [srh-142::RFP] done GSE229078


	IL2 D/V NC4085: otIs846 [egas-1p::GFP + unc-122::GFP]; otIs355 [rab-3p(prom1)::2xNLS::TagRFP] IV 


	IL2 L/R yes 


	URA no 


	IL1 NY2021 ynls21[flp-3p::GFP, rol-6] done GSE229078


	ASK OH15857
[srg-8p::gfp; inx-6p18::tagRFP] done GSE229078


	DVB XE2835 wpIs39 [unc-47p:mCherry] X. otIs92 [flp-10::GFP] done GSE229078


	ADL OH16093 pha-1 (e2123) otEx6853 [srv-3p:: gfp; pha-1 (+); otls356[rab-3p::2xNLS::TagRFP] done GSE229078


	ASI FK181 ksIs2[daf-7p::GFP, rol-6(su10060] done GSE229078


	PVR no 


	I1 OH18012: pha-1(e2123); otEx7948 [lgc-8p::mNeonGreen::PH::p10; pha-1(+)] no 


	I2 no 


	I3 OH18011: pha-1(e2123); otEx7947 [W02A2.5p::GFP; pha-1(+)] no 


	I4 no 


	I5 ynIs37[flp-13::gfp]; ufIs26[unc-4::mCherry] done GSE229078


	I6 no 


	M1 no 


	M2 no 


	M3 no 


	M4 OH16144 ceh-28p::4NLS::GFP done 


	M5 no 


	MC no 


	MI no 


	NSM LX837[tph-1::GFP] done GSE229078


	OLQ OH16177 otEx7647 ttll-9p::GFP done GSE229078


	RIB DCR9309: pha-1(e2123) III; olaEx5505[Psto-3B::GFP; Pinx-1: :mCherry; pha-1 rescue no 


	RIP no 


	RIR no 


	RIH no 


	SAB no 


	SIA XE2789 ccIs4595 [ceh-24::GFP + rol-6(su1006)]. wpEx482 [ceh-17::NLS::TagRFP + pha-1(+)] done GSE229078


	SMB OH16781 otIs796 X[flp-12DEL3::gfp; unc-122p::Red] done GSE229078


	ADA no 


	ADE no 


	AIY OH99 mgIs18 [ttx-3p::GFP] done GSE229078


	ALN no 


	AVH OH16483 [unc-119(ed3); otIs768 [hlh-34p::gfp, unc-119(+)]] done GSE229078


	AVJ no 


	AVK ZX1834  zxIs31[pflp-1(332bp)::mCherry]

done GSE229078


	AWB CX3553_lin-15(n765) kyls104[str-1p::GFP, lin-15(+)] done GSE169137


	BAG RJP567_ynls64[flp-17p::GFP] done GSE229078


	DA NC2913_[hdIs1 (unc-53::GFP rol-6(su1000); ufIs26 (unc-4::mCherry)]. Sorted GFP+/mCherry+ cells. done GSE229078


	DD NC3296_juIs223[pttr-39::mCherry; pttx-3::GFP]; ynIs37[flp-13::GFP]. DDs are GFP+/mCherry+ done GSE169137


	OLL OH16719 otIs138 [ser-2p3 + rol-6(su1006)] X; otIs521[eat-4prom8::tagRFP + ttx-3::GFP] done GSE229078


	PDB no 


	PLN no 


	PQR no 


	PVD NC3182_[otIs138(ser2prom3::GFP + rol-6); otIs396(ace-1prom2::NLS::TagRFP); otIs181(dat-1::mCherry)] done GSE169137


	PVN no 


	PVW no 


	RIC OH16150 nIs107(tbh-1::gfp) III; zfIs10(tdc-1::m-cherry) IV done GSE229078


	RIS HBR1261 goeIs500[flp-11prom::mKate; unc-119(+)] done GSE229078


	RIS NC2015 [ynIs40(flp-11::GFP); hdIs32(glr-1::DsRed2] done GSE229078


	VD NC3296 juIs223[pttr-39::mCherry; pttx-3::GFP]; ynIs37[flp-13::GFP]. VDs are mCherry only. done GSE169137


	RMD LR no

Neuronal class	Validated genetic approach	Sorting/Sequencing	First data release
AWA	PY10421 [gpa-4p(d6)::myrGFP]	done	GSE169137
LUA	XE2299 pha-1(e2123); wpEx389 [C39H7.2::NLS GFP + pha-1]	done	GSE229078
PHA	OH16065 otls747 [srg-13p::gfp]; otls355 [rab-3p::2xNLS::TagRFP]	done	GSE229078
PHB	no
RMF	no
RMH	no
SAA	no
SIB	no
ASH	no
RME	OH17124 otIs837 [unc-25(prom3)(del1)::GFP]	done	GSE229078
PDE	no
ALM	no
AVM	gcy-35::GFP; mec-3::RFP	done	GSE229078
FLP	TU5066 mec-3p::RFP;sto-5p::GFP	no
PLM	no
PVM	TU6276 uIs115 [mec-17p::RFP]; kuIs70 [alr-1::GFP; rol-6(D)]	done	GSE229078
SDQ	no
RIV	no
RMD DV	OH16077 pha-1 (e2123) otEx7419 [mgl-1 p::gfp,pha-1 (+)]	done
SMD	OH15507 otIs439 [lad-2::GFP]; hdIs32 [glr-1::dsRED2]	done	GSE229078
AIN	OH16151 lgc-35::tagRFP; ynIs34[flp-19::GFP]; pha-1	done	GSE229078
AS	no
AVB	no
DB	no
DVA	yes (see Robinson et al., Plos One, 2013)	no
PDA	no
PVC	OH16749 hdIs32[glr-1::DsRed2]; ynIs54[flp-20p::GFP]	done	GSE229078
RIM	OH16917 otEx7693 [F23H12.7p(RIM)::tagRFP + pha-1(+)]; pha-1(e2123)	done	GSE229078
VA	NC3577 ufIs26 [unc-4p::mCherry + lin-15(+)] II. otIs707 [bnc-1p(1.8kb)::GFP]	no
VB	NC3577: bnc-1::GFP; ufIs26 [unc-4::mCh]	done	GSE229078
AVD	no
AVE	NC1750[KM173(opt-3::GFP[pRF4]); hdIs32 (glr-1::DsRed2)]	done	GSE169137
AVA	NC1749[OH4326(rig-3::GFP[pha-1+]); hdIs32 (glr-1::DsRed2)]	done	GSE229078
DVC	NC3540: otIs458_[ceh-63prom::GFP, unc-119(+)]	done	GSE229078
PHC	no
AFD	oyls17 [gcy-8p::GFP, lin-15(+)]	done	GSE229078
AIB	no
ASEL	OH3191 otIs3 V [gcy-7::GFP + lin-15(+)]	done	GSE229078
ASER	VH804 ntls1[gcy-5p::GFP]	done	GSE229078
AWC	OH16052 otls745 [ceh-36p3::npp-9::mCherry::BLRP·:3x FLAG::npp-9 3'UTR]	done	GSE229078
CEP	OH17489 egIs1 [dat-1p::GFP]. otIs860 [flp-33p::tagRFP]	done	GSE229078
ASG	OH14973 pha-1(e2123);him-5(e1490) otEx6966[srw-119prom::GFP, pha-1(+)]	done	GSE169137
AVG	ZM9592 hpIs670 [pnmr-1::GFP ZF; pglr-5::ZIF-1::SL2::wCherry; lin-15(+)]	done	GSE169137
PVP	XE3004 wpEx505[Pocr-3::mEGFP] ;pha-1(e2123)III	done	GSE229078
RIA	IK705 njls10[glr-3::GFP]	done	GSE229078
ADF	NC3604 myls13 [klp-6p::GFP]. oyIs51 [srh-142::RFP]	done	GSE229078
ASJ	no
AIM	otIs520 [eat-4::prom11] (also in PHC)	done	GSE229078
AIZ	no
ALA	no
AQR	no
AUA	no
AVF	no
AVL	NY2051 ynIs51 [Pflp-22::GFP] ,[flp-22p::GFP]; him-5(e1490)	done	GSE229078
CAN	wpIs107[F49C12.10::GFP]I	done	GSE229078
PVQ	OH16952 otEx7568 [nlp-17::GFP + pha-1(+)]; pha-1(e2123)	done	GSE229078
PVT	no
RID	no
RIF	no
RIG	no
RMG	OH17211: pha-1(e2123) otEx7567[nlp-56p::gfp, pha-1(+)]	done
URB	no
URX	no
URY	no
VC	NC3524 ufIs26 [punc-4::mCherry] II; vsIs13[lin-11::pes-10::GFP + lin-15(+)] IV	done	GSE229078
AIA	no
BDU	no
HSN	OH15925 otIs737[otEx7359[cat-4p::mCherry, rol-6]]	done	GSE229078
IL2	NC3604 myls13 [klp-6p::GFP]. oyIs51 [srh-142::RFP]	done	GSE229078
IL2 D/V	NC4085: otIs846 [egas-1p::GFP + unc-122::GFP]; otIs355 [rab-3p(prom1)::2xNLS::TagRFP] IV
IL2 L/R	yes
URA	no
IL1	NY2021 ynls21[flp-3p::GFP, rol-6]	done	GSE229078
ASK	OH15857 [srg-8p::gfp; inx-6p18::tagRFP]	done	GSE229078
DVB	XE2835 wpIs39 [unc-47p:mCherry] X. otIs92 [flp-10::GFP]	done	GSE229078
ADL	OH16093 pha-1 (e2123) otEx6853 [srv-3p:: gfp; pha-1 (+); otls356[rab-3p::2xNLS::TagRFP]	done	GSE229078
ASI	FK181 ksIs2[daf-7p::GFP, rol-6(su10060]	done	GSE229078
PVR	no
I1	OH18012: pha-1(e2123); otEx7948 [lgc-8p::mNeonGreen::PH::p10; pha-1(+)]	no
I2	no
I3	OH18011: pha-1(e2123); otEx7947 [W02A2.5p::GFP; pha-1(+)]	no
I4	no
I5	ynIs37[flp-13::gfp]; ufIs26[unc-4::mCherry]	done	GSE229078
I6	no
M1	no
M2	no
M3	no
M4	OH16144 ceh-28p::4NLS::GFP	done
M5	no
MC	no
MI	no
NSM	LX837[tph-1::GFP]	done	GSE229078
OLQ	OH16177 otEx7647 ttll-9p::GFP	done	GSE229078
RIB	DCR9309: pha-1(e2123) III; olaEx5505[Psto-3B::GFP; Pinx-1: :mCherry; pha-1 rescue	no
RIP	no
RIR	no
RIH	no
SAB	no
SIA	XE2789 ccIs4595 [ceh-24::GFP + rol-6(su1006)]. wpEx482 [ceh-17::NLS::TagRFP + pha-1(+)]	done	GSE229078
SMB	OH16781 otIs796 X[flp-12DEL3::gfp; unc-122p::Red]	done	GSE229078
ADA	no
ADE	no
AIY	OH99 mgIs18 [ttx-3p::GFP]	done	GSE229078
ALN	no
AVH	OH16483 [unc-119(ed3); otIs768 [hlh-34p::gfp, unc-119(+)]]	done	GSE229078
AVJ	no
AVK	ZX1834 zxIs31[pflp-1(332bp)::mCherry]	done	GSE229078
AWB	CX3553_lin-15(n765) kyls104[str-1p::GFP, lin-15(+)]	done	GSE169137
BAG	RJP567_ynls64[flp-17p::GFP]	done	GSE229078
DA	NC2913_[hdIs1 (unc-53::GFP rol-6(su1000); ufIs26 (unc-4::mCherry)]. Sorted GFP+/mCherry+ cells.	done	GSE229078
DD	NC3296_juIs223[pttr-39::mCherry; pttx-3::GFP]; ynIs37[flp-13::GFP]. DDs are GFP+/mCherry+	done	GSE169137
OLL	OH16719 otIs138 [ser-2p3 + rol-6(su1006)] X; otIs521[eat-4prom8::tagRFP + ttx-3::GFP]	done	GSE229078
PDB	no
PLN	no
PQR	no
PVD	NC3182_[otIs138(ser2prom3::GFP + rol-6); otIs396(ace-1prom2::NLS::TagRFP); otIs181(dat-1::mCherry)]	done	GSE169137
PVN	no
PVW	no
RIC	OH16150 nIs107(tbh-1::gfp) III; zfIs10(tdc-1::m-cherry) IV	done	GSE229078
RIS	HBR1261 goeIs500[flp-11prom::mKate; unc-119(+)]	done	GSE229078
RIS	NC2015 [ynIs40(flp-11::GFP); hdIs32(glr-1::DsRed2]	done	GSE229078
VD	NC3296 juIs223[pttr-39::mCherry; pttx-3::GFP]; ynIs37[flp-13::GFP]. VDs are mCherry only.	done	GSE169137
RMD LR	no